APIs
Use the following API's to access covidelm data in your applications:
http://camkipedia.embl.de/api/gene/JSON
http://camkipedia.embl.de/api/all/JSON
http://camkipedia.embl.de/api/variant/JSON
http://camkipedia.embl.de/api/viralprot/JSON/<Viral_Protein_Name>
http://camkipedia.embl.de/api/viralprot/JSON/<Viral_Vrotein_ID>
http://camkipedia.embl.de/api/viralprot/JSON/<Viral_Protein_Gene_Name>
| Field |
Description |
Example |
| <Viral_Protein_Name> |
Name of the Viral Protein |
P0DTC2 |
| <Viral_Protein_ID> |
ID of the Viral Protein |
SPIKE_SARS2 |
| <Viral_Protein_Gene_Name> |
Gene Name of the Viral Protein |
S |
http://camkipedia.embl.de/api/interactor/JSON/<Interactors_Accession_ID>
http://camkipedia.embl.de/api/interactor/JSON/<Interactors_PID>
http://camkipedia.embl.de/api/interactor/JSON/<Interactors_Gene_Name>
| Field |
Description |
Example |
| <Interactors_Accession_ID> |
Uniprot Accession of the Human Interactor |
P55210 |
| <Interactors_PID> |
Protein ID of the interactor |
CASP7_HUMAN |
| <Interactors_Gene_Name> |
Gene Name of the Interactor |
CASP7 |
http://camkipedia.embl.de/api/motif/JSON/<Motif_Name>
http://camkipedia.embl.de/api/motif/JSON/<RegEx>
| Field |
Description |
Example |
| <Motif_Name> |
Motif Name |
CLV_C14_Caspase3-7 |
| <RegEx> |
Regular Expression of the Match |
[KR]R. |
http://camkipedia.embl.de/api/virusprotdom/JSON
http://camkipedia.embl.de/api/virusprotdom/JSON/<Motif_PFAMID>
http://camkipedia.embl.de/api/virusprotdom/JSON/<Motif_PFAM_Name>
| Field |
Description |
Example |
| <Motif_PFAMID> |
Motif PFAM ID |
PF16451 |
| <Motif_PFAM_Name> |
Motif PFAM Name |
bCoV_S1_N |
http://camkipedia.embl.de/api/humanprotdom/JSON/<INT_PFAM_ID>
http://camkipedia.embl.de/api/humanprotdom/JSON/<INT_PFAM_Name>
| Field |
Description |
Example |
| <INT_PFAM_ID> |
Interactor's PFAM ID |
PF00656 |
| <INT_PFAM_Name> |
Interactor's PFAM Name |
Peptidase_C14 |
http://camkipedia.embl.de/api/mutation/JSON
http://camkipedia.embl.de/api/mutation/JSON/<Accession>/<Position>
| Field |
Description |
Example |
| <Accession> |
Uniprot Accession of the Viral Protein |
P0DTC2 |
| <Position> |
Mutation Position |
111 |
http://camkipedia.embl.de/api/phosphosite/JSON
http://camkipedia.embl.de/api/phosphosite/JSON/<Accession>/<Position>
| Field |
Description |
Example |
| <Accession> |
Uniprot Accession of the Viral Protein |
P0DTC9 |
| <Position> |
Mutation Position |
105 |
http://camkipedia.embl.de/api/variant/JSON/<Accession>/<Position>
| Field |
Description |
Example |
| <Accession> |
Uniprot Accession of the Viral Protein |
P0DTC2 |
| <Position> |
Mutation Position along with the point mutation |
P681H |
http://camkipedia.embl.de/api/drug_var/JSON
http://camkipedia.embl.de/api/drug_var/JSON/<Drug_Name>
| Field |
Description |
Example |
| <Drug_Name> |
Uniprot Accession of the Viral Protein |
Adavosertib |
http://camkipedia.embl.de/api/drug_oth/JSON
http://camkipedia.embl.de/api/drug_oth/JSON/<Drug_Name>
| Field |
Description |
Example |
| <Drug_Name> |
Uniprot Accession of the Viral Protein |
Adavosertib |
Replace "JSON" with "CSV" in the API string to download the results as a CSV file